BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B05LP1|AL429166
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 1713 0.0
>3x_Contig1334
Length = 7302
Score = 1713 bits (862), Expect = 0.0
Identities = 874/880 (99%)
Strand = Plus / Plus
Query: 1 cttttagtcttaagtctctagtttattttttctttcttcaacttctctcaacttctgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3365 cttttagtcttaagtctctagtttattttttctttcttcaacttctctcaacttctgtaa 3424
Query: 61 tagaacaaagaacaagaaggtaccctaacgatgcggatagcaagcttccgatgtcaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3425 tagaacaaagaacaagaaggtaccctaacgatgcggatagcaagcttccgatgtcaattc 3484
Query: 121 tctaaatgtgcaggagggtattaccctcaatctatatagagaaaacgccttaactgaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3485 tctaaatgtgcaggagggtattaccctcaatctatatagagaaaacgccttaactgaatt 3544
Query: 181 caaatattgattccgcaaggccgttagcgcgtatgttttcttgctcccactgatcatatc 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3545 caaatattgattccgcaaggccgttagcgcgtatgtattcttgctcccactgatcatatc 3604
Query: 241 ctgttggcaagtcgccactaattcccctgcgccagaacaaatccccatgcaaaacaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3605 ctgttggcaagtcgccactaattcccctgcgccagaacaaatccccatgcaaaacaagca 3664
Query: 301 tggcccaataatactcgtattcatgactgttcaaacacacctgcttgtatgtttcacagc 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3665 tggcccaataatactcgtattcatgactgtacaaacacacctgcttgtatgtttcacagc 3724
Query: 361 agaaacccttgattagccatgaattgtcgagcatcgtagtcgcatcactgatcgattggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3725 agaaacccttgattagccatgaattgtcgagcatcgtagtcgcatcactgatcgattggc 3784
Query: 421 taccatatttcacaagtatacctacaagagtcaggtaccaagatcgtatattgaaaatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3785 taccatatttcacaagtatacctacaagagtcaggtaccaagatcgtatattgaaaatga 3844
Query: 481 ctgtttccgaagtatcatcatcatccacaaagagaacattatcatactgaaagcgtgggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3845 ctgtttccgaagtatcatcatcatccacaaagagaacattatcatactgaaagcgtgggt 3904
Query: 541 cggatatcattttggtccgtattggttgtatgcactacgtttttatacatattatacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3905 cggatatcattttggtccgtattggttgtatgcactacgtttttatacatattatacaat 3964
Query: 601 gttacttactagctggtgtctttttttctcagttcctttaggttaattaacgatttcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3965 gttacttactagctggtgtctttttttctcagttcctttaggttaattaacgatttcctt 4024
Query: 661 tatgctttgatgaggttgctcaatgacaagcactttattccactgagaggattggcatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4025 tatgctttgatgaggttgctcaatgacaagcactttattccactgagaggattggcatct 4084
Query: 721 ttgtccatgtaatttattgctcttgatcaggaatataaaccaattaaaccgggtcaatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4085 ttgtccatgtaatttattgctcttgatcaggaatataaaccaattaaaccgggtcaatca 4144
Query: 781 tcaggttatgtcagagccttgcgcmaatctcthatggaaattcattttgcttctcaatta 840
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 4145 tcaggttatgtcagagccttgcgcaaatctctaatggaaattcattttgcttctcaatta 4204
Query: 841 aaaggragagtattctcgaagggtttagtcatactactct 880
||||| |||||||||||||||| |||||||||||||||||
Sbjct: 4205 aaaggaagagtattctcgaaggatttagtcatactactct 4244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6850
Number of Sequences: 1807
Number of extensions: 6850
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)